I love EFi, think it does a fantastic job of fuelling an engine and when we all know enough about it will be easier to deal with than jets and screws and all that malarky but carbies do a perfectly adequate job and there appears to be a greater 'knowledge base' on tuning them. If it were me I'd go for the bike I really want and worry about its fuelling system later.
EFI has the benefit of quick starting and running well immediately, without having to wait for warm up. It doesn't get out of tune and I think it can better handle changes in temperature, altitude and fuel quality, within reason. To me, the more you are looking for dependability, or daily use, the more that might cause you to lean toward EFI (although certainly not exclude carbs, just possibly favor EFI).
On the other hand, when I bought my Bonnie recently, I intentionally bought a 2006 model with carburetors. For me, it is a second bike. I already have a BMW F650GS with electronic control. I was looking for something with carbs to give it more of an old-time feel and because I don't mind having to worry about cleaning and tuning them on a second bike that is not a daily driver.
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