Hello Frosty,
I have a 1999 Daytona 1200 SE. Thankfully, it has 6-pot brakes standard, so if you prefer you can put these on your bike. The '99 is the only year that had them, I believe.
I also had a lot of dive, and lift too on hard acceleration. I found it disconcerting. I fixed the problem with Race Tech progressive forks and Gold Seals:
www.racetech.com On the rear I put a Hagon monoshock:
http://www.hagon-shocks.co.uk/main1st.htm Now my big D12 handles like a dream. The dive and lift is now very well controlled, and amazingly the suspension is as compliant as the stock setup.
Hagon has progressive springs too, but I feel Race Tech is better.